Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Carlr-201ENSMUST00000181515 2574 ntBASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Thap2-203ENSMUST00000218989 527 ntBASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Gm10154-201ENSMUST00000084445 354 ntBASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rnf20Q5DTM8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rnf20Q5DTM8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Gm5177-201ENSMUST00000183092 997 ntBASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rnf20Q5DTM8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Gm12134-201ENSMUST00000122109 520 ntBASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf20Q5DTM8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms