Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Gm22189-201ENSMUST00000103822 86 ntBASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.53■□□□□ 0.24
Srrm1Q52KI8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Srrm1Q52KI8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Gm6007-201ENSMUST00000208170 823 ntBASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Srrm1Q52KI8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Srrm1Q52KI8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Gm18062-201ENSMUST00000208020 547 ntBASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Gm18055-201ENSMUST00000208254 547 ntBASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Srrm1Q52KI8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Gm45668-201ENSMUST00000211271 493 ntBASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms