Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Gm23547-201ENSMUST00000158210 271 ntBASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Gm7367-201ENSMUST00000057611 492 ntBASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Gm43859-201ENSMUST00000200075 1412 ntBASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cks1brtQ3UNC9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1brtQ3UNC9 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Cks1brtQ3UNC9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1brtQ3UNC9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1brtQ3UNC9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cks1brtQ3UNC9 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Gm29707-201ENSMUST00000196325 491 ntBASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms