Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gm5682-201ENSMUST00000173402 505 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gm2756-201ENSMUST00000195851 400 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gm43767-201ENSMUST00000198933 381 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Psmb5-202ENSMUST00000227257 622 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp39Q3TIX9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp39Q3TIX9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp39Q3TIX9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Usp39Q3TIX9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp39Q3TIX9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp39Q3TIX9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Usp39Q3TIX9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Gm25990-201ENSMUST00000102440 86 ntBASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Gm27702-201ENSMUST00000184512 56 ntBASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.33□□□□□ -0.12
Usp39Q3TIX9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Gm11779-201ENSMUST00000118541 368 ntBASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.32□□□□□ -0.12
Usp39Q3TIX9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Usp39Q3TIX9 Carlr-201ENSMUST00000181515 2574 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms