Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cul4aQ3TCH7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cul4aQ3TCH7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cul4aQ3TCH7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Cul4aQ3TCH7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cul4aQ3TCH7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cul4aQ3TCH7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cul4aQ3TCH7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.52■□□□□ 0.08
Cul4aQ3TCH7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cul4aQ3TCH7 Gm7977-201ENSMUST00000193787 748 ntBASIC15.52■□□□□ 0.08
Cul4aQ3TCH7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cul4aQ3TCH7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cul4aQ3TCH7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cul4aQ3TCH7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cul4aQ3TCH7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cul4aQ3TCH7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cul4aQ3TCH7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cul4aQ3TCH7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cul4aQ3TCH7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cul4aQ3TCH7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Cul4aQ3TCH7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cul4aQ3TCH7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Gm7862-201ENSMUST00000121461 292 ntBASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cul4aQ3TCH7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms