Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs3Q05895 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs3Q05895 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Thbs3Q05895 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs3Q05895 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs3Q05895 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs3Q05895 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Thbs3Q05895 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Thbs3Q05895 Gm5264-201ENSMUST00000190584 848 ntBASIC12.98□□□□□ -0.33
Thbs3Q05895 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.98□□□□□ -0.33
Thbs3Q05895 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Thbs3Q05895 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Thbs3Q05895 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thbs3Q05895 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Thbs3Q05895 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.97□□□□□ -0.33
Thbs3Q05895 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Thbs3Q05895 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Gm15427-201ENSMUST00000117288 531 ntBASIC12.97□□□□□ -0.33
Thbs3Q05895 Gm13464-201ENSMUST00000119418 935 ntBASIC12.97□□□□□ -0.33
Thbs3Q05895 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.97□□□□□ -0.33
Thbs3Q05895 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
Thbs3Q05895 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.97□□□□□ -0.33
Thbs3Q05895 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.97□□□□□ -0.33
Thbs3Q05895 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.97□□□□□ -0.33
Thbs3Q05895 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.97□□□□□ -0.33
Thbs3Q05895 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Thbs3Q05895 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Thbs3Q05895 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.97□□□□□ -0.33
Thbs3Q05895 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thbs3Q05895 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.96□□□□□ -0.33
Thbs3Q05895 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Thbs3Q05895 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms