Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC14.45□□□□□ -0.1
Col9a1Q05722 Gm3344-201ENSMUST00000169610 603 ntBASIC14.45□□□□□ -0.1
Col9a1Q05722 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.45□□□□□ -0.1
Col9a1Q05722 Gm43435-201ENSMUST00000199996 1438 ntBASIC14.45□□□□□ -0.1
Col9a1Q05722 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC14.45□□□□□ -0.1
Col9a1Q05722 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Gm9520-201ENSMUST00000209460 1253 ntBASIC14.45□□□□□ -0.1
Col9a1Q05722 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.45□□□□□ -0.1
Col9a1Q05722 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.45□□□□□ -0.1
Col9a1Q05722 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col9a1Q05722 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Col9a1Q05722 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.45□□□□□ -0.1
Col9a1Q05722 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col9a1Q05722 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.45□□□□□ -0.1
Col9a1Q05722 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.44□□□□□ -0.1
Col9a1Q05722 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col9a1Q05722 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.44□□□□□ -0.1
Col9a1Q05722 Gm36982-201ENSMUST00000193796 1128 ntBASIC14.44□□□□□ -0.1
Col9a1Q05722 Gm37259-201ENSMUST00000193903 849 ntBASIC14.44□□□□□ -0.1
Col9a1Q05722 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC14.44□□□□□ -0.1
Col9a1Q05722 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.44□□□□□ -0.1
Col9a1Q05722 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.44□□□□□ -0.1
Col9a1Q05722 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.44□□□□□ -0.1
Col9a1Q05722 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.44□□□□□ -0.1
Col9a1Q05722 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Col9a1Q05722 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col9a1Q05722 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col9a1Q05722 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col9a1Q05722 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a1Q05722 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col9a1Q05722 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.43□□□□□ -0.1
Col9a1Q05722 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col9a1Q05722 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Col9a1Q05722 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Col9a1Q05722 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC14.43□□□□□ -0.1
Col9a1Q05722 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC14.43□□□□□ -0.1
Col9a1Q05722 Gm9368-201ENSMUST00000219348 831 ntBASIC14.43□□□□□ -0.1
Col9a1Q05722 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Col9a1Q05722 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.43□□□□□ -0.1
Col9a1Q05722 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.43□□□□□ -0.1
Col9a1Q05722 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.43□□□□□ -0.1
Col9a1Q05722 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.43□□□□□ -0.1
Col9a1Q05722 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a1Q05722 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col9a1Q05722 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a1Q05722 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Col9a1Q05722 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a1Q05722 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col9a1Q05722 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a1Q05722 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a1Q05722 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col9a1Q05722 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a1Q05722 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col9a1Q05722 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC14.42□□□□□ -0.1
Col9a1Q05722 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.42□□□□□ -0.1
Col9a1Q05722 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.42□□□□□ -0.1
Col9a1Q05722 Gm7287-201ENSMUST00000205267 602 ntBASIC14.42□□□□□ -0.1
Col9a1Q05722 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.42□□□□□ -0.1
Col9a1Q05722 Gm8959-201ENSMUST00000213150 571 ntBASIC14.42□□□□□ -0.1
Col9a1Q05722 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a1Q05722 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms