Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smn1P97801 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Smn1P97801 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.7□□□□□ -0.38
Smn1P97801 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smn1P97801 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smn1P97801 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smn1P97801 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smn1P97801 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.7□□□□□ -0.38
Smn1P97801 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.7□□□□□ -0.38
Smn1P97801 Gm8097-201ENSMUST00000117903 829 ntBASIC12.7□□□□□ -0.38
Smn1P97801 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.7□□□□□ -0.38
Smn1P97801 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Smn1P97801 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smn1P97801 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Smn1P97801 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Smn1P97801 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.7□□□□□ -0.38
Smn1P97801 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.7□□□□□ -0.38
Smn1P97801 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Smn1P97801 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smn1P97801 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Smn1P97801 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smn1P97801 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.7□□□□□ -0.38
Smn1P97801 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Smn1P97801 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.7□□□□□ -0.38
Smn1P97801 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smn1P97801 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smn1P97801 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.7□□□□□ -0.38
Smn1P97801 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.7□□□□□ -0.38
Smn1P97801 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smn1P97801 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Smn1P97801 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.69□□□□□ -0.38
Smn1P97801 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.69□□□□□ -0.38
Smn1P97801 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Smn1P97801 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Smn1P97801 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Smn1P97801 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Smn1P97801 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.69□□□□□ -0.38
Smn1P97801 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Smn1P97801 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.69□□□□□ -0.38
Smn1P97801 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.69□□□□□ -0.38
Smn1P97801 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.69□□□□□ -0.38
Smn1P97801 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.69□□□□□ -0.38
Smn1P97801 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Smn1P97801 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.69□□□□□ -0.38
Smn1P97801 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Smn1P97801 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.69□□□□□ -0.38
Smn1P97801 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Smn1P97801 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Smn1P97801 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Smn1P97801 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smn1P97801 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Smn1P97801 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Smn1P97801 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.68□□□□□ -0.38
Smn1P97801 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smn1P97801 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Smn1P97801 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.68□□□□□ -0.38
Smn1P97801 Gm6659-201ENSMUST00000174752 547 ntBASIC12.68□□□□□ -0.38
Smn1P97801 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Smn1P97801 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms