Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Thumpd3P97770 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Thumpd3P97770 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Thumpd3P97770 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Thumpd3P97770 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.08■□□□□ 0
Thumpd3P97770 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.08■□□□□ 0
Thumpd3P97770 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Thumpd3P97770 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Thumpd3P97770 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Thumpd3P97770 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.08■□□□□ 0
Thumpd3P97770 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.08■□□□□ 0
Thumpd3P97770 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.08■□□□□ 0
Thumpd3P97770 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Thumpd3P97770 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Thumpd3P97770 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.07■□□□□ 0
Thumpd3P97770 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.07■□□□□ 0
Thumpd3P97770 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.07■□□□□ 0
Thumpd3P97770 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.07■□□□□ 0
Thumpd3P97770 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Gm6089-201ENSMUST00000197666 938 ntBASIC15.07■□□□□ 0
Thumpd3P97770 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.07■□□□□ 0
Thumpd3P97770 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Gm15590-201ENSMUST00000078419 552 ntBASIC15.07■□□□□ 0
Thumpd3P97770 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Thumpd3P97770 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.07■□□□□ 0
Thumpd3P97770 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.07■□□□□ 0
Thumpd3P97770 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd3P97770 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.06■□□□□ 0
Thumpd3P97770 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.06■□□□□ 0
Thumpd3P97770 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.06■□□□□ 0
Thumpd3P97770 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.06■□□□□ 0
Thumpd3P97770 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Gm8344-201ENSMUST00000119813 856 ntBASIC15.06■□□□□ 0
Thumpd3P97770 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.06■□□□□ 0
Thumpd3P97770 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.06■□□□□ 0
Thumpd3P97770 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Thumpd3P97770 Gm8000-201ENSMUST00000188378 592 ntBASIC15.06■□□□□ 0
Thumpd3P97770 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Thumpd3P97770 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.06■□□□□ 0
Thumpd3P97770 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Thumpd3P97770 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.06■□□□□ 0
Thumpd3P97770 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.06■□□□□ 0
Thumpd3P97770 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd3P97770 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Thumpd3P97770 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Thumpd3P97770 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd3P97770 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd3P97770 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd3P97770 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd3P97770 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd3P97770 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd3P97770 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.05■□□□□ 0
Thumpd3P97770 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd3P97770 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd3P97770 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd3P97770 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd3P97770 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd3P97770 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd3P97770 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd3P97770 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.05■□□□□ -0
Thumpd3P97770 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.05■□□□□ -0
Thumpd3P97770 Gm11780-201ENSMUST00000136880 516 ntBASIC15.05■□□□□ -0
Thumpd3P97770 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
Thumpd3P97770 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.05■□□□□ -0
Thumpd3P97770 Gm6550-201ENSMUST00000187574 993 ntBASIC15.05■□□□□ -0
Thumpd3P97770 Gm37935-201ENSMUST00000192012 982 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms