Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
SgcbP82349 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.18□□□□□ -0.3
SgcbP82349 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
SgcbP82349 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.18□□□□□ -0.3
SgcbP82349 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.18□□□□□ -0.3
SgcbP82349 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.18□□□□□ -0.3
SgcbP82349 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.18□□□□□ -0.3
SgcbP82349 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SgcbP82349 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.18□□□□□ -0.3
SgcbP82349 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.18□□□□□ -0.3
SgcbP82349 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SgcbP82349 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.18□□□□□ -0.3
SgcbP82349 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcbP82349 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SgcbP82349 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.17□□□□□ -0.3
SgcbP82349 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.17□□□□□ -0.3
SgcbP82349 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SgcbP82349 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
SgcbP82349 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
SgcbP82349 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.17□□□□□ -0.3
SgcbP82349 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Rpph1-201ENSMUST00000175096 319 ntBASIC13.17□□□□□ -0.3
SgcbP82349 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.17□□□□□ -0.3
SgcbP82349 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.17□□□□□ -0.3
SgcbP82349 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.17□□□□□ -0.3
SgcbP82349 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
SgcbP82349 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SgcbP82349 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcbP82349 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SgcbP82349 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SgcbP82349 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SgcbP82349 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.16□□□□□ -0.3
SgcbP82349 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SgcbP82349 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Rprl2-201ENSMUST00000157150 290 ntBASIC13.16□□□□□ -0.3
SgcbP82349 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
SgcbP82349 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms