Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nup43P59235 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup43P59235 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup43P59235 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup43P59235 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup43P59235 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup43P59235 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nup43P59235 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup43P59235 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup43P59235 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup43P59235 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.97□□□□□ -0.17
Nup43P59235 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.97□□□□□ -0.17
Nup43P59235 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.97□□□□□ -0.17
Nup43P59235 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.97□□□□□ -0.17
Nup43P59235 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.97□□□□□ -0.17
Nup43P59235 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.97□□□□□ -0.17
Nup43P59235 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.97□□□□□ -0.17
Nup43P59235 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nup43P59235 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.97□□□□□ -0.17
Nup43P59235 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.97□□□□□ -0.17
Nup43P59235 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nup43P59235 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup43P59235 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.97□□□□□ -0.17
Nup43P59235 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
Nup43P59235 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nup43P59235 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nup43P59235 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Nup43P59235 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.96□□□□□ -0.17
Nup43P59235 Gm11025-201ENSMUST00000140773 466 ntBASIC13.96□□□□□ -0.17
Nup43P59235 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nup43P59235 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.96□□□□□ -0.17
Nup43P59235 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.96□□□□□ -0.17
Nup43P59235 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nup43P59235 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup43P59235 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nup43P59235 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup43P59235 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup43P59235 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup43P59235 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Nup43P59235 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nup43P59235 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Nup43P59235 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.95□□□□□ -0.18
Nup43P59235 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.95□□□□□ -0.18
Nup43P59235 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.95□□□□□ -0.18
Nup43P59235 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.95□□□□□ -0.18
Nup43P59235 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms