Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Msh6P54276 Gm12138-201ENSMUST00000122180 951 ntBASIC18.64■□□□□ 0.57
Msh6P54276 Mir1897-201ENSMUST00000122581 272 ntBASIC18.64■□□□□ 0.57
Msh6P54276 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Msh6P54276 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Msh6P54276 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.64■□□□□ 0.57
Msh6P54276 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Msh6P54276 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.64■□□□□ 0.57
Msh6P54276 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh6P54276 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh6P54276 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Msh6P54276 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Msh6P54276 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.63■□□□□ 0.57
Msh6P54276 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.63■□□□□ 0.57
Msh6P54276 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.63■□□□□ 0.57
Msh6P54276 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.63■□□□□ 0.57
Msh6P54276 Gm3436-201ENSMUST00000179930 840 ntBASIC18.63■□□□□ 0.57
Msh6P54276 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.63■□□□□ 0.57
Msh6P54276 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Gm42612-201ENSMUST00000197986 623 ntBASIC18.63■□□□□ 0.57
Msh6P54276 Gm43170-201ENSMUST00000199827 612 ntBASIC18.63■□□□□ 0.57
Msh6P54276 Gm46209-201ENSMUST00000217912 553 ntBASIC18.63■□□□□ 0.57
Msh6P54276 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh6P54276 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Msh6P54276 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Msh6P54276 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Msh6P54276 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Gm9726-201ENSMUST00000180321 678 ntBASIC18.62■□□□□ 0.57
Msh6P54276 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Msh6P54276 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.62■□□□□ 0.57
Msh6P54276 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Gm20445-201ENSMUST00000061905 565 ntBASIC18.62■□□□□ 0.57
Msh6P54276 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.62■□□□□ 0.57
Msh6P54276 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh6P54276 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
Msh6P54276 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Msh6P54276 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Gm45668-201ENSMUST00000211271 493 ntBASIC18.61■□□□□ 0.57
Msh6P54276 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.61■□□□□ 0.57
Msh6P54276 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Msh6P54276 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Msh6P54276 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.6■□□□□ 0.57
Msh6P54276 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms