Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Prox1P48437 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prox1P48437 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Prox1P48437 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.23□□□□□ -0.13
Prox1P48437 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prox1P48437 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.23□□□□□ -0.13
Prox1P48437 Gm15165-201ENSMUST00000118140 502 ntBASIC14.23□□□□□ -0.13
Prox1P48437 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Gm25745-201ENSMUST00000174945 133 ntBASIC14.23□□□□□ -0.13
Prox1P48437 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.23□□□□□ -0.13
Prox1P48437 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.23□□□□□ -0.13
Prox1P48437 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.23□□□□□ -0.13
Prox1P48437 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.23□□□□□ -0.13
Prox1P48437 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.23□□□□□ -0.13
Prox1P48437 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.23□□□□□ -0.13
Prox1P48437 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
Prox1P48437 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.23□□□□□ -0.13
Prox1P48437 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Prox1P48437 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.23□□□□□ -0.13
Prox1P48437 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prox1P48437 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.22□□□□□ -0.13
Prox1P48437 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.22□□□□□ -0.13
Prox1P48437 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prox1P48437 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.22□□□□□ -0.13
Prox1P48437 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prox1P48437 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.22□□□□□ -0.13
Prox1P48437 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.22□□□□□ -0.13
Prox1P48437 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.22□□□□□ -0.13
Prox1P48437 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prox1P48437 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prox1P48437 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Prox1P48437 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Prox1P48437 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.21□□□□□ -0.13
Prox1P48437 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prox1P48437 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prox1P48437 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prox1P48437 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prox1P48437 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prox1P48437 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Prox1P48437 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prox1P48437 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.21□□□□□ -0.13
Prox1P48437 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Prox1P48437 Gm12008-201ENSMUST00000117791 755 ntBASIC14.21□□□□□ -0.13
Prox1P48437 Gm12497-201ENSMUST00000138778 237 ntBASIC14.21□□□□□ -0.13
Prox1P48437 Gm17807-201ENSMUST00000186869 298 ntBASIC14.21□□□□□ -0.13
Prox1P48437 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.21□□□□□ -0.13
Prox1P48437 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.21□□□□□ -0.13
Prox1P48437 Gm18622-201ENSMUST00000219361 595 ntBASIC14.21□□□□□ -0.13
Prox1P48437 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prox1P48437 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Prox1P48437 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prox1P48437 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prox1P48437 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prox1P48437 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prox1P48437 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Prox1P48437 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prox1P48437 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.21□□□□□ -0.14
Prox1P48437 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prox1P48437 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Prox1P48437 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prox1P48437 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prox1P48437 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prox1P48437 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.2□□□□□ -0.14
Prox1P48437 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Prox1P48437 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms