Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gli1P47806 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gli1P47806 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gli1P47806 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.47□□□□□ -0.09
Gli1P47806 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gli1P47806 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gli1P47806 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gli1P47806 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gli1P47806 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gli1P47806 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.47□□□□□ -0.09
Gli1P47806 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Gli1P47806 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.46□□□□□ -0.09
Gli1P47806 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Gli1P47806 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Gli1P47806 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.46□□□□□ -0.09
Gli1P47806 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.46□□□□□ -0.09
Gli1P47806 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.46□□□□□ -0.09
Gli1P47806 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.46□□□□□ -0.09
Gli1P47806 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.46□□□□□ -0.09
Gli1P47806 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Gm9727-201ENSMUST00000161387 555 ntBASIC14.46□□□□□ -0.09
Gli1P47806 Gm27628-201ENSMUST00000184911 107 ntBASIC14.46□□□□□ -0.09
Gli1P47806 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.46□□□□□ -0.09
Gli1P47806 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.46□□□□□ -0.09
Gli1P47806 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Gli1P47806 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gli1P47806 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gli1P47806 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Gli1P47806 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gli1P47806 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gli1P47806 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Gli1P47806 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Gli1P47806 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.45□□□□□ -0.1
Gli1P47806 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gli1P47806 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Gm13036-201ENSMUST00000117799 748 ntBASIC14.45□□□□□ -0.1
Gli1P47806 Gm4459-201ENSMUST00000118750 468 ntBASIC14.45□□□□□ -0.1
Gli1P47806 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.45□□□□□ -0.1
Gli1P47806 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gli1P47806 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.45□□□□□ -0.1
Gli1P47806 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Gli1P47806 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.45□□□□□ -0.1
Gli1P47806 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.45□□□□□ -0.1
Gli1P47806 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gli1P47806 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gli1P47806 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.44□□□□□ -0.1
Gli1P47806 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Gli1P47806 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gli1P47806 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Gm4995-201ENSMUST00000117247 432 ntBASIC14.44□□□□□ -0.1
Gli1P47806 Gm12497-201ENSMUST00000138778 237 ntBASIC14.44□□□□□ -0.1
Gli1P47806 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.44□□□□□ -0.1
Gli1P47806 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Gli1P47806 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.44□□□□□ -0.1
Gli1P47806 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Gli1P47806 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms