Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.14□□□□□ -0.47
Timp3P39876 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Timp3P39876 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.14□□□□□ -0.47
Timp3P39876 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Timp3P39876 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Timp3P39876 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Timp3P39876 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.14□□□□□ -0.47
Timp3P39876 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.14□□□□□ -0.47
Timp3P39876 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Gm45747-201ENSMUST00000212203 999 ntBASIC12.14□□□□□ -0.47
Timp3P39876 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Timp3P39876 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.14□□□□□ -0.47
Timp3P39876 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Timp3P39876 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Timp3P39876 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.14□□□□□ -0.47
Timp3P39876 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Timp3P39876 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.13□□□□□ -0.47
Timp3P39876 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Timp3P39876 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.13□□□□□ -0.47
Timp3P39876 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Timp3P39876 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.13□□□□□ -0.47
Timp3P39876 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Timp3P39876 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Timp3P39876 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Timp3P39876 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.13□□□□□ -0.47
Timp3P39876 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.13□□□□□ -0.47
Timp3P39876 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Timp3P39876 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.13□□□□□ -0.47
Timp3P39876 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Timp3P39876 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.13□□□□□ -0.47
Timp3P39876 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.12□□□□□ -0.47
Timp3P39876 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Timp3P39876 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.12□□□□□ -0.47
Timp3P39876 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Timp3P39876 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Timp3P39876 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.12□□□□□ -0.47
Timp3P39876 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.12□□□□□ -0.47
Timp3P39876 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.12□□□□□ -0.47
Timp3P39876 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.12□□□□□ -0.47
Timp3P39876 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms