Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Fen1P39749 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.91□□□□□ -0.02
Fen1P39749 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.91□□□□□ -0.02
Fen1P39749 Gm8344-201ENSMUST00000119813 856 ntBASIC14.91□□□□□ -0.02
Fen1P39749 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.91□□□□□ -0.02
Fen1P39749 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.91□□□□□ -0.02
Fen1P39749 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.91□□□□□ -0.02
Fen1P39749 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Fen1P39749 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Fen1P39749 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.9□□□□□ -0.02
Fen1P39749 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Fen1P39749 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Fen1P39749 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.9□□□□□ -0.02
Fen1P39749 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Fen1P39749 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Fen1P39749 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Olfr129-201ENSMUST00000122318 993 ntBASIC14.9□□□□□ -0.02
Fen1P39749 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.9□□□□□ -0.02
Fen1P39749 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.9□□□□□ -0.02
Fen1P39749 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.9□□□□□ -0.02
Fen1P39749 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Carlr-201ENSMUST00000181515 2574 ntBASIC14.9□□□□□ -0.02
Fen1P39749 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.9□□□□□ -0.02
Fen1P39749 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Fen1P39749 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Fen1P39749 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Fen1P39749 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Fen1P39749 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Fen1P39749 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.89□□□□□ -0.03
Fen1P39749 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Fen1P39749 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Fen1P39749 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Fen1P39749 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.89□□□□□ -0.03
Fen1P39749 Gm28033-201ENSMUST00000184224 96 ntBASIC14.89□□□□□ -0.03
Fen1P39749 Gm27867-201ENSMUST00000184778 125 ntBASIC14.89□□□□□ -0.03
Fen1P39749 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Fen1P39749 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.89□□□□□ -0.03
Fen1P39749 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.89□□□□□ -0.03
Fen1P39749 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fen1P39749 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fen1P39749 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fen1P39749 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fen1P39749 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Fen1P39749 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fen1P39749 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fen1P39749 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fen1P39749 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.88□□□□□ -0.03
Fen1P39749 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fen1P39749 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fen1P39749 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fen1P39749 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms