Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Slc6a1P31648 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc6a1P31648 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Gm17971-201ENSMUST00000190239 806 ntBASIC12.74□□□□□ -0.37
Slc6a1P31648 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a1P31648 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.74□□□□□ -0.37
Slc6a1P31648 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Slc6a1P31648 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.73□□□□□ -0.37
Slc6a1P31648 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Slc6a1P31648 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.73□□□□□ -0.37
Slc6a1P31648 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Slc6a1P31648 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.73□□□□□ -0.37
Slc6a1P31648 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.73□□□□□ -0.37
Slc6a1P31648 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Slc6a1P31648 Gm28033-201ENSMUST00000184224 96 ntBASIC12.73□□□□□ -0.37
Slc6a1P31648 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Slc6a1P31648 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.73□□□□□ -0.37
Slc6a1P31648 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Slc6a1P31648 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Slc6a1P31648 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.73□□□□□ -0.37
Slc6a1P31648 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a1P31648 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.72□□□□□ -0.37
Slc6a1P31648 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Gm14722-201ENSMUST00000118943 689 ntBASIC12.72□□□□□ -0.37
Slc6a1P31648 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.72□□□□□ -0.37
Slc6a1P31648 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms