Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm9103-201ENSMUST00000119371 405 ntBASIC14.2□□□□□ -0.14
BdnfP21237 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.2□□□□□ -0.14
BdnfP21237 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.2□□□□□ -0.14
BdnfP21237 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Gm4535-201ENSMUST00000182274 558 ntBASIC14.2□□□□□ -0.14
BdnfP21237 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.2□□□□□ -0.14
BdnfP21237 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Gm10355-201ENSMUST00000097146 517 ntBASIC14.2□□□□□ -0.14
BdnfP21237 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.2□□□□□ -0.14
BdnfP21237 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
BdnfP21237 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
BdnfP21237 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
BdnfP21237 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
BdnfP21237 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.19□□□□□ -0.14
BdnfP21237 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.19□□□□□ -0.14
BdnfP21237 Gm10499-201ENSMUST00000174094 934 ntBASIC14.19□□□□□ -0.14
BdnfP21237 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.19□□□□□ -0.14
BdnfP21237 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Gm34391-201ENSMUST00000203706 907 ntBASIC14.19□□□□□ -0.14
BdnfP21237 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.19□□□□□ -0.14
BdnfP21237 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.19□□□□□ -0.14
BdnfP21237 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.19□□□□□ -0.14
BdnfP21237 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.19□□□□□ -0.14
BdnfP21237 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
BdnfP21237 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BdnfP21237 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
BdnfP21237 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
BdnfP21237 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.18□□□□□ -0.14
BdnfP21237 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.18□□□□□ -0.14
BdnfP21237 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
BdnfP21237 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.18□□□□□ -0.14
BdnfP21237 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC14.18□□□□□ -0.14
BdnfP21237 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
BdnfP21237 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
BdnfP21237 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.18□□□□□ -0.14
BdnfP21237 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
BdnfP21237 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BdnfP21237 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms