Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.17■□□□□ 0.02
Rb1P13405 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.16■□□□□ 0.02
Rb1P13405 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.16■□□□□ 0.02
Rb1P13405 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.16■□□□□ 0.02
Rb1P13405 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.16■□□□□ 0.02
Rb1P13405 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.16■□□□□ 0.02
Rb1P13405 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.16■□□□□ 0.02
Rb1P13405 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rb1P13405 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rb1P13405 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rb1P13405 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.15■□□□□ 0.02
Rb1P13405 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rb1P13405 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.15■□□□□ 0.02
Rb1P13405 Gm13365-201ENSMUST00000121188 973 ntBASIC15.15■□□□□ 0.02
Rb1P13405 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Gm44335-201ENSMUST00000196879 141 ntBASIC15.15■□□□□ 0.02
Rb1P13405 Gm44297-201ENSMUST00000198304 141 ntBASIC15.15■□□□□ 0.02
Rb1P13405 Gm44346-201ENSMUST00000198851 141 ntBASIC15.15■□□□□ 0.02
Rb1P13405 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Rb1P13405 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.15■□□□□ 0.02
Rb1P13405 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rb1P13405 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.15■□□□□ 0.02
Rb1P13405 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rb1P13405 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rb1P13405 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rb1P13405 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rb1P13405 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rb1P13405 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rb1P13405 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.14■□□□□ 0.01
Rb1P13405 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Rb1P13405 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rb1P13405 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Rb1P13405 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Rprl2-201ENSMUST00000157150 290 ntBASIC15.14■□□□□ 0.01
Rb1P13405 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Thap2-203ENSMUST00000218989 527 ntBASIC15.14■□□□□ 0.01
Rb1P13405 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rb1P13405 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.14■□□□□ 0.01
Rb1P13405 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rb1P13405 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms