Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.19□□□□□ -0.78
Smim1P0C8K7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.19□□□□□ -0.78
Smim1P0C8K7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.19□□□□□ -0.78
Smim1P0C8K7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smim1P0C8K7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 H2-K2-201ENSMUST00000174250 1049 ntBASIC10.18□□□□□ -0.78
Smim1P0C8K7 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.18□□□□□ -0.78
Smim1P0C8K7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smim1P0C8K7 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.17□□□□□ -0.78
Smim1P0C8K7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms