Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PtcraP0C6B2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PtcraP0C6B2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PtcraP0C6B2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PtcraP0C6B2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
PtcraP0C6B2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PtcraP0C6B2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PtcraP0C6B2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PtcraP0C6B2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
PtcraP0C6B2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.85□□□□□ -0.35
PtcraP0C6B2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PtcraP0C6B2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Rpph1-201ENSMUST00000175096 319 ntBASIC12.84□□□□□ -0.35
PtcraP0C6B2 Gm9726-201ENSMUST00000180321 678 ntBASIC12.84□□□□□ -0.35
PtcraP0C6B2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
PtcraP0C6B2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PtcraP0C6B2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
PtcraP0C6B2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
PtcraP0C6B2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
PtcraP0C6B2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Efs-202ENSMUST00000227037 2540 ntBASIC12.83□□□□□ -0.36
PtcraP0C6B2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.83□□□□□ -0.36
PtcraP0C6B2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Gm14494-201ENSMUST00000118786 435 ntBASIC12.83□□□□□ -0.36
PtcraP0C6B2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Gm17271-201ENSMUST00000165535 355 ntBASIC12.83□□□□□ -0.36
PtcraP0C6B2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PtcraP0C6B2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Gm8000-201ENSMUST00000188378 592 ntBASIC12.83□□□□□ -0.36
PtcraP0C6B2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.83□□□□□ -0.36
PtcraP0C6B2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.83□□□□□ -0.36
PtcraP0C6B2 Gm45612-201ENSMUST00000211320 160 ntBASIC12.83□□□□□ -0.36
PtcraP0C6B2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.83□□□□□ -0.36
PtcraP0C6B2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.83□□□□□ -0.36
PtcraP0C6B2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Gm10175-201ENSMUST00000086013 645 ntBASIC12.83□□□□□ -0.36
PtcraP0C6B2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
PtcraP0C6B2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PtcraP0C6B2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PtcraP0C6B2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PtcraP0C6B2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PtcraP0C6B2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PtcraP0C6B2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.82□□□□□ -0.36
PtcraP0C6B2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PtcraP0C6B2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PtcraP0C6B2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms