Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CcnkO88874 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CcnkO88874 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.19□□□□□ -0.3
CcnkO88874 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CcnkO88874 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.19□□□□□ -0.3
CcnkO88874 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.19□□□□□ -0.3
CcnkO88874 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.19□□□□□ -0.3
CcnkO88874 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.19□□□□□ -0.3
CcnkO88874 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CcnkO88874 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.19□□□□□ -0.3
CcnkO88874 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.19□□□□□ -0.3
CcnkO88874 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CcnkO88874 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CcnkO88874 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CcnkO88874 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.19□□□□□ -0.3
CcnkO88874 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CcnkO88874 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnkO88874 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CcnkO88874 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CcnkO88874 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CcnkO88874 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CcnkO88874 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.18□□□□□ -0.3
CcnkO88874 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.18□□□□□ -0.3
CcnkO88874 Gm25925-201ENSMUST00000158314 306 ntBASIC13.18□□□□□ -0.3
CcnkO88874 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CcnkO88874 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.18□□□□□ -0.3
CcnkO88874 Gm8655-201ENSMUST00000221159 852 ntBASIC13.18□□□□□ -0.3
CcnkO88874 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CcnkO88874 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CcnkO88874 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CcnkO88874 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.18□□□□□ -0.3
CcnkO88874 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CcnkO88874 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcnkO88874 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.18□□□□□ -0.3
CcnkO88874 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
CcnkO88874 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.17□□□□□ -0.3
CcnkO88874 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CcnkO88874 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.17□□□□□ -0.3
CcnkO88874 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.17□□□□□ -0.3
CcnkO88874 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.17□□□□□ -0.3
CcnkO88874 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CcnkO88874 Ank2-226ENSMUST00000189368 339 ntBASIC13.17□□□□□ -0.3
CcnkO88874 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.17□□□□□ -0.3
CcnkO88874 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms