Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Best1O88870 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Best1O88870 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.19□□□□□ -0.14
Best1O88870 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Best1O88870 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Best1O88870 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Gm13453-201ENSMUST00000118708 357 ntBASIC14.18□□□□□ -0.14
Best1O88870 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Best1O88870 Gm27306-201ENSMUST00000183970 107 ntBASIC14.18□□□□□ -0.14
Best1O88870 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Best1O88870 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Best1O88870 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.18□□□□□ -0.14
Best1O88870 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Best1O88870 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.18□□□□□ -0.14
Best1O88870 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.18□□□□□ -0.14
Best1O88870 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Best1O88870 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Best1O88870 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Best1O88870 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.17□□□□□ -0.14
Best1O88870 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.17□□□□□ -0.14
Best1O88870 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.17□□□□□ -0.14
Best1O88870 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Best1O88870 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Best1O88870 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Best1O88870 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.17□□□□□ -0.14
Best1O88870 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.16□□□□□ -0.14
Best1O88870 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.16□□□□□ -0.14
Best1O88870 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Best1O88870 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Best1O88870 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Best1O88870 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Gm13223-201ENSMUST00000118609 747 ntBASIC14.16□□□□□ -0.14
Best1O88870 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.16□□□□□ -0.14
Best1O88870 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Best1O88870 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Gm27533-201ENSMUST00000183800 152 ntBASIC14.16□□□□□ -0.14
Best1O88870 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms