Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tom1O88746 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC19.35■□□□□ 0.69
Tom1O88746 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tom1O88746 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Tom1O88746 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Tom1O88746 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tom1O88746 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tom1O88746 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tom1O88746 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tom1O88746 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tom1O88746 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tom1O88746 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tom1O88746 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tom1O88746 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tom1O88746 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tom1O88746 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.34■□□□□ 0.69
Tom1O88746 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tom1O88746 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tom1O88746 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tom1O88746 Gm11524-201ENSMUST00000119349 807 ntBASIC19.34■□□□□ 0.69
Tom1O88746 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC19.34■□□□□ 0.69
Tom1O88746 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC19.34■□□□□ 0.69
Tom1O88746 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC19.34■□□□□ 0.69
Tom1O88746 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tom1O88746 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tom1O88746 Gm17823-201ENSMUST00000217830 1006 ntBASIC19.34■□□□□ 0.69
Tom1O88746 Cts7-204ENSMUST00000225321 1257 ntBASIC19.34■□□□□ 0.69
Tom1O88746 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tom1O88746 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tom1O88746 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tom1O88746 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tom1O88746 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tom1O88746 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tom1O88746 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tom1O88746 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tom1O88746 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tom1O88746 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tom1O88746 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tom1O88746 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tom1O88746 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Tom1O88746 Gm22018-201ENSMUST00000104357 131 ntBASIC19.33■□□□□ 0.68
Tom1O88746 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tom1O88746 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC19.33■□□□□ 0.68
Tom1O88746 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tom1O88746 Gm37008-201ENSMUST00000195712 319 ntBASIC19.33■□□□□ 0.68
Tom1O88746 Gm43094-201ENSMUST00000196549 921 ntBASIC19.33■□□□□ 0.68
Tom1O88746 Gm5363-201ENSMUST00000211927 938 ntBASIC19.33■□□□□ 0.68
Tom1O88746 Gm9368-201ENSMUST00000219348 831 ntBASIC19.33■□□□□ 0.68
Tom1O88746 AC140406.1-201ENSMUST00000226481 465 ntBASIC19.33■□□□□ 0.68
Tom1O88746 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Tom1O88746 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Tom1O88746 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tom1O88746 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Tom1O88746 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tom1O88746 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tom1O88746 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tom1O88746 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tom1O88746 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tom1O88746 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tom1O88746 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tom1O88746 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tom1O88746 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tom1O88746 Gm8749-201ENSMUST00000117737 331 ntBASIC19.32■□□□□ 0.68
Tom1O88746 Gm12997-201ENSMUST00000120207 640 ntBASIC19.32■□□□□ 0.68
Tom1O88746 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC19.32■□□□□ 0.68
Tom1O88746 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC19.32■□□□□ 0.68
Tom1O88746 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC19.32■□□□□ 0.68
Tom1O88746 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC19.32■□□□□ 0.68
Tom1O88746 Gm18935-201ENSMUST00000212692 664 ntBASIC19.32■□□□□ 0.68
Tom1O88746 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tom1O88746 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tom1O88746 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tom1O88746 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC19.32■□□□□ 0.68
Tom1O88746 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tom1O88746 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Tom1O88746 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tom1O88746 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Tom1O88746 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tom1O88746 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tom1O88746 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tom1O88746 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tom1O88746 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tom1O88746 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tom1O88746 AC113441.2-201ENSMUST00000221538 1468 ntBASIC19.31■□□□□ 0.68
Tom1O88746 Gm12416-201ENSMUST00000120911 1008 ntBASIC19.31■□□□□ 0.68
Tom1O88746 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tom1O88746 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC19.31■□□□□ 0.68
Tom1O88746 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tom1O88746 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC19.31■□□□□ 0.68
Tom1O88746 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC19.31■□□□□ 0.68
Tom1O88746 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Tom1O88746 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tom1O88746 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tom1O88746 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tom1O88746 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tom1O88746 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.31■□□□□ 0.68
Tom1O88746 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
Tom1O88746 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tom1O88746 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tom1O88746 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms