Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm19164-201ENSMUST00000210667 640 ntBASIC14.18□□□□□ -0.14
Hcn3O88705 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hcn3O88705 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Hcn3O88705 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn3O88705 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Hcn3O88705 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Hcn3O88705 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.17□□□□□ -0.14
Hcn3O88705 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hcn3O88705 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Hcn3O88705 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.17□□□□□ -0.14
Hcn3O88705 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.17□□□□□ -0.14
Hcn3O88705 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.17□□□□□ -0.14
Hcn3O88705 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.17□□□□□ -0.14
Hcn3O88705 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.17□□□□□ -0.14
Hcn3O88705 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hcn3O88705 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn3O88705 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Hcn3O88705 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hcn3O88705 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Hcn3O88705 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hcn3O88705 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.16□□□□□ -0.14
Hcn3O88705 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hcn3O88705 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hcn3O88705 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hcn3O88705 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.16□□□□□ -0.14
Hcn3O88705 Gm15372-201ENSMUST00000120729 834 ntBASIC14.16□□□□□ -0.14
Hcn3O88705 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.16□□□□□ -0.14
Hcn3O88705 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Gm9172-201ENSMUST00000212092 954 ntBASIC14.16□□□□□ -0.14
Hcn3O88705 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.16□□□□□ -0.14
Hcn3O88705 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.16□□□□□ -0.14
Hcn3O88705 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Hcn3O88705 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.16□□□□□ -0.14
Hcn3O88705 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn3O88705 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Hcn3O88705 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hcn3O88705 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.15□□□□□ -0.14
Hcn3O88705 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.15□□□□□ -0.14
Hcn3O88705 Gm15165-201ENSMUST00000118140 502 ntBASIC14.15□□□□□ -0.14
Hcn3O88705 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hcn3O88705 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.15□□□□□ -0.14
Hcn3O88705 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.15□□□□□ -0.14
Hcn3O88705 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hcn3O88705 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hcn3O88705 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms