Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
Gm10139O88245 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC9.02□□□□□ -0.97
Gm10139O88245 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC9.02□□□□□ -0.97
Gm10139O88245 Gm15173-201ENSMUST00000122049 433 ntBASIC9.02□□□□□ -0.97
Gm10139O88245 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC9.02□□□□□ -0.97
Gm10139O88245 Gm43935-201ENSMUST00000203569 1050 ntBASIC9.02□□□□□ -0.97
Gm10139O88245 Gm45167-201ENSMUST00000208007 322 ntBASIC9.02□□□□□ -0.97
Gm10139O88245 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC9.02□□□□□ -0.97
Gm10139O88245 Gm6376-201ENSMUST00000209407 580 ntBASIC9.02□□□□□ -0.97
Gm10139O88245 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC9.02□□□□□ -0.97
Gm10139O88245 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Gm10139O88245 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Gm10139O88245 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm10139O88245 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Gm10139O88245 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm10139O88245 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Gm10139O88245 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC9.01□□□□□ -0.97
Gm10139O88245 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC9.01□□□□□ -0.97
Gm10139O88245 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Gm8749-201ENSMUST00000117737 331 ntBASIC9.01□□□□□ -0.97
Gm10139O88245 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm10139O88245 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm10139O88245 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC9.01□□□□□ -0.97
Gm10139O88245 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Gm10139O88245 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Gm10139O88245 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC9.01□□□□□ -0.97
Gm10139O88245 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC9.01□□□□□ -0.97
Gm10139O88245 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm10139O88245 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC9.01□□□□□ -0.97
Gm10139O88245 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm10139O88245 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Gm10139O88245 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Gm10139O88245 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.01□□□□□ -0.97
Gm10139O88245 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Gm10139O88245 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm10139O88245 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm10139O88245 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm10139O88245 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm10139O88245 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm10139O88245 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm10139O88245 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm10139O88245 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm10139O88245 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Gm10139O88245 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC9□□□□□ -0.97
Gm10139O88245 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm10139O88245 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm10139O88245 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm10139O88245 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Gm10139O88245 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms