Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ttc3O88196 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Ttc3O88196 Efs-202ENSMUST00000227037 2540 ntBASIC15.41■□□□□ 0.06
Ttc3O88196 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Ttc3O88196 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ttc3O88196 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.4■□□□□ 0.06
Ttc3O88196 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Ttc3O88196 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.4■□□□□ 0.06
Ttc3O88196 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.4■□□□□ 0.06
Ttc3O88196 Gm5745-201ENSMUST00000183748 313 ntBASIC15.4■□□□□ 0.06
Ttc3O88196 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ttc3O88196 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ttc3O88196 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Ttc3O88196 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Gm3436-201ENSMUST00000179930 840 ntBASIC15.4■□□□□ 0.06
Ttc3O88196 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.4■□□□□ 0.06
Ttc3O88196 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ttc3O88196 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ttc3O88196 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Ttc3O88196 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.39■□□□□ 0.05
Ttc3O88196 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.39■□□□□ 0.05
Ttc3O88196 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.39■□□□□ 0.05
Ttc3O88196 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Ttc3O88196 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ttc3O88196 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ttc3O88196 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Gm16215-201ENSMUST00000161990 637 ntBASIC15.38■□□□□ 0.05
Ttc3O88196 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.38■□□□□ 0.05
Ttc3O88196 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.38■□□□□ 0.05
Ttc3O88196 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.38■□□□□ 0.05
Ttc3O88196 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ttc3O88196 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.38■□□□□ 0.05
Ttc3O88196 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.38■□□□□ 0.05
Ttc3O88196 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ttc3O88196 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ttc3O88196 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ttc3O88196 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ttc3O88196 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms