Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Gm27646-201ENSMUST00000183989 110 ntBASIC13.42□□□□□ -0.26
Pdlim3O70209 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pdlim3O70209 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.42□□□□□ -0.26
Pdlim3O70209 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pdlim3O70209 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim3O70209 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.41□□□□□ -0.26
Pdlim3O70209 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.41□□□□□ -0.26
Pdlim3O70209 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.41□□□□□ -0.26
Pdlim3O70209 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pdlim3O70209 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.41□□□□□ -0.26
Pdlim3O70209 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.41□□□□□ -0.26
Pdlim3O70209 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.41□□□□□ -0.26
Pdlim3O70209 Gm6296-201ENSMUST00000222599 943 ntBASIC13.41□□□□□ -0.26
Pdlim3O70209 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Pdlim3O70209 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.41□□□□□ -0.26
Pdlim3O70209 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pdlim3O70209 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim3O70209 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Pdlim3O70209 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Pdlim3O70209 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.4□□□□□ -0.26
Pdlim3O70209 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.4□□□□□ -0.26
Pdlim3O70209 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Pdlim3O70209 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pdlim3O70209 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pdlim3O70209 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Pdlim3O70209 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pdlim3O70209 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.4□□□□□ -0.26
Pdlim3O70209 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.4□□□□□ -0.26
Pdlim3O70209 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim3O70209 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pdlim3O70209 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pdlim3O70209 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim3O70209 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim3O70209 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim3O70209 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim3O70209 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim3O70209 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms