Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm43767-201ENSMUST00000198933 381 ntBASIC13.43□□□□□ -0.26
Rnf13O54965 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.43□□□□□ -0.26
Rnf13O54965 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf13O54965 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf13O54965 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf13O54965 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rnf13O54965 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf13O54965 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf13O54965 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rnf13O54965 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf13O54965 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.43□□□□□ -0.26
Rnf13O54965 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf13O54965 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf13O54965 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf13O54965 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf13O54965 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf13O54965 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rnf13O54965 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rnf13O54965 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rnf13O54965 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.42□□□□□ -0.26
Rnf13O54965 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.42□□□□□ -0.26
Rnf13O54965 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Rnf13O54965 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rnf13O54965 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.42□□□□□ -0.26
Rnf13O54965 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Rnf13O54965 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rnf13O54965 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.42□□□□□ -0.26
Rnf13O54965 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.42□□□□□ -0.26
Rnf13O54965 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.42□□□□□ -0.26
Rnf13O54965 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.42□□□□□ -0.26
Rnf13O54965 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.42□□□□□ -0.26
Rnf13O54965 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.42□□□□□ -0.26
Rnf13O54965 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.42□□□□□ -0.26
Rnf13O54965 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rnf13O54965 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf13O54965 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Rnf13O54965 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rnf13O54965 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Rnf13O54965 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Rnf13O54965 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf13O54965 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.41□□□□□ -0.26
Rnf13O54965 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.41□□□□□ -0.26
Rnf13O54965 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.41□□□□□ -0.26
Rnf13O54965 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rnf13O54965 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Rnf13O54965 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Rnf13O54965 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rnf13O54965 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rnf13O54965 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf13O54965 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.41□□□□□ -0.26
Rnf13O54965 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf13O54965 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.4□□□□□ -0.26
Rnf13O54965 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf13O54965 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms