Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Dkk1O54908 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Dkk1O54908 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Dkk1O54908 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Dkk1O54908 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.28□□□□□ -0.28
Dkk1O54908 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Gm15933-201ENSMUST00000117215 616 ntBASIC13.28□□□□□ -0.28
Dkk1O54908 Gm13806-201ENSMUST00000117822 325 ntBASIC13.28□□□□□ -0.28
Dkk1O54908 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.28□□□□□ -0.28
Dkk1O54908 Gm11764-201ENSMUST00000120221 623 ntBASIC13.28□□□□□ -0.28
Dkk1O54908 Gm13740-201ENSMUST00000120590 310 ntBASIC13.28□□□□□ -0.28
Dkk1O54908 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.28□□□□□ -0.28
Dkk1O54908 Gm29640-201ENSMUST00000187972 278 ntBASIC13.28□□□□□ -0.28
Dkk1O54908 Gm5268-201ENSMUST00000189212 940 ntBASIC13.28□□□□□ -0.28
Dkk1O54908 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Gm37700-201ENSMUST00000192617 965 ntBASIC13.28□□□□□ -0.28
Dkk1O54908 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC13.28□□□□□ -0.28
Dkk1O54908 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.28□□□□□ -0.28
Dkk1O54908 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Dkk1O54908 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.28□□□□□ -0.28
Dkk1O54908 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Dkk1O54908 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Dkk1O54908 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.28□□□□□ -0.28
Dkk1O54908 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.28□□□□□ -0.28
Dkk1O54908 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 AC153959.1-201ENSMUST00000213617 1694 ntBASIC13.28□□□□□ -0.28
Dkk1O54908 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Dkk1O54908 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Dkk1O54908 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Dkk1O54908 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Dkk1O54908 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Dkk1O54908 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Dkk1O54908 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Dkk1O54908 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Dkk1O54908 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Gm9506-201ENSMUST00000118516 320 ntBASIC13.27□□□□□ -0.29
Dkk1O54908 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.27□□□□□ -0.29
Dkk1O54908 Gm15173-201ENSMUST00000122049 433 ntBASIC13.27□□□□□ -0.29
Dkk1O54908 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Gm8151-201ENSMUST00000184817 871 ntBASIC13.27□□□□□ -0.29
Dkk1O54908 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Gm37934-201ENSMUST00000192902 402 ntBASIC13.27□□□□□ -0.29
Dkk1O54908 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.27□□□□□ -0.29
Dkk1O54908 Gm5717-201ENSMUST00000198243 1062 ntBASIC13.27□□□□□ -0.29
Dkk1O54908 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Dkk1O54908 Gm18195-201ENSMUST00000207604 706 ntBASIC13.27□□□□□ -0.29
Dkk1O54908 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC13.27□□□□□ -0.29
Dkk1O54908 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.27□□□□□ -0.29
Dkk1O54908 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC13.27□□□□□ -0.29
Dkk1O54908 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 AV026068-213ENSMUST00000223675 1171 ntBASIC13.27□□□□□ -0.29
Dkk1O54908 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Dkk1O54908 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Dkk1O54908 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.27□□□□□ -0.29
Dkk1O54908 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.27□□□□□ -0.29
Dkk1O54908 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Dkk1O54908 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Dkk1O54908 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Dkk1O54908 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Dkk1O54908 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dkk1O54908 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dkk1O54908 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dkk1O54908 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Dkk1O54908 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Dkk1O54908 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dkk1O54908 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Dkk1O54908 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Dkk1O54908 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms