Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ercc2O08811 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.14■□□□□ 0.01
Ercc2O08811 Gm17271-201ENSMUST00000165535 355 ntBASIC15.14■□□□□ 0.01
Ercc2O08811 Rpph1-201ENSMUST00000175096 319 ntBASIC15.14■□□□□ 0.01
Ercc2O08811 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.14■□□□□ 0.01
Ercc2O08811 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.14■□□□□ 0.01
Ercc2O08811 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ercc2O08811 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.14■□□□□ 0.01
Ercc2O08811 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ercc2O08811 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.13■□□□□ 0.01
Ercc2O08811 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ercc2O08811 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.13■□□□□ 0.01
Ercc2O08811 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ercc2O08811 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.13■□□□□ 0.01
Ercc2O08811 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ercc2O08811 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.13■□□□□ 0.01
Ercc2O08811 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ercc2O08811 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ercc2O08811 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ercc2O08811 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ercc2O08811 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ercc2O08811 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.12■□□□□ 0.01
Ercc2O08811 Gm13464-201ENSMUST00000119418 935 ntBASIC15.12■□□□□ 0.01
Ercc2O08811 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.12■□□□□ 0.01
Ercc2O08811 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.12■□□□□ 0.01
Ercc2O08811 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.12■□□□□ 0.01
Ercc2O08811 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.12■□□□□ 0.01
Ercc2O08811 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ercc2O08811 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Ercc2O08811 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ercc2O08811 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ercc2O08811 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ercc2O08811 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Ercc2O08811 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ercc2O08811 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ercc2O08811 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.11■□□□□ 0.01
Ercc2O08811 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ercc2O08811 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ercc2O08811 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ercc2O08811 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ercc2O08811 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ercc2O08811 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.11■□□□□ 0.01
Ercc2O08811 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ercc2O08811 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ercc2O08811 Gm4995-201ENSMUST00000117247 432 ntBASIC15.11■□□□□ 0.01
Ercc2O08811 Gm8749-201ENSMUST00000117737 331 ntBASIC15.11■□□□□ 0.01
Ercc2O08811 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.11■□□□□ 0.01
Ercc2O08811 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ercc2O08811 Gm20553-201ENSMUST00000204205 844 ntBASIC15.11■□□□□ 0.01
Ercc2O08811 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.11■□□□□ 0.01
Ercc2O08811 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.11■□□□□ 0.01
Ercc2O08811 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ercc2O08811 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ercc2O08811 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms