Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tnfrsf11bO08712 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.03■□□□□ -0
Tnfrsf11bO08712 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf11bO08712 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.02■□□□□ -0
Tnfrsf11bO08712 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf11bO08712 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf11bO08712 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf11bO08712 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.02■□□□□ -0
Tnfrsf11bO08712 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf11bO08712 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf11bO08712 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf11bO08712 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Tnfrsf11bO08712 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf11bO08712 Gm13884-201ENSMUST00000118103 829 ntBASIC15.02■□□□□ -0
Tnfrsf11bO08712 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf11bO08712 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf11bO08712 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.02□□□□□ -0.01
Tnfrsf11bO08712 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf11bO08712 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf11bO08712 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf11bO08712 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf11bO08712 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms