Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Raet1aO08602 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Raet1aO08602 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Carlr-201ENSMUST00000181515 2574 ntBASIC13.11□□□□□ -0.31
Raet1aO08602 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.11□□□□□ -0.31
Raet1aO08602 Gm1401-201ENSMUST00000122048 772 ntBASIC13.11□□□□□ -0.31
Raet1aO08602 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.11□□□□□ -0.31
Raet1aO08602 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.11□□□□□ -0.31
Raet1aO08602 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Raet1aO08602 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Raet1aO08602 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.11□□□□□ -0.31
Raet1aO08602 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.11□□□□□ -0.31
Raet1aO08602 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Raet1aO08602 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Raet1aO08602 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Raet1aO08602 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.11□□□□□ -0.31
Raet1aO08602 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1aO08602 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Raet1aO08602 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Raet1aO08602 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.1□□□□□ -0.31
Raet1aO08602 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.1□□□□□ -0.31
Raet1aO08602 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Raet1aO08602 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Raet1aO08602 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Gm2272-201ENSMUST00000194903 582 ntBASIC13.1□□□□□ -0.31
Raet1aO08602 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.1□□□□□ -0.31
Raet1aO08602 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raet1aO08602 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.1□□□□□ -0.31
Raet1aO08602 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.1□□□□□ -0.31
Raet1aO08602 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.1□□□□□ -0.31
Raet1aO08602 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.1□□□□□ -0.31
Raet1aO08602 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Raet1aO08602 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.1□□□□□ -0.31
Raet1aO08602 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raet1aO08602 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raet1aO08602 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Raet1aO08602 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.1□□□□□ -0.31
Raet1aO08602 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1aO08602 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Raet1aO08602 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Raet1aO08602 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Raet1aO08602 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.09□□□□□ -0.31
Raet1aO08602 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.09□□□□□ -0.31
Raet1aO08602 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.09□□□□□ -0.31
Raet1aO08602 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.09□□□□□ -0.31
Raet1aO08602 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Raet1aO08602 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms