Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
B020004C17RikJ3QP07 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
B020004C17RikJ3QP07 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Gm27701-201ENSMUST00000184498 110 ntBASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
B020004C17RikJ3QP07 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
B020004C17RikJ3QP07 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms