Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NpcdF8VQB8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NpcdF8VQB8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.74■□□□□ 0.43
NpcdF8VQB8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Gm16476-201ENSMUST00000221544 139 ntBASIC17.74■□□□□ 0.43
NpcdF8VQB8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.74■□□□□ 0.43
NpcdF8VQB8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NpcdF8VQB8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NpcdF8VQB8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Gm21854-201ENSMUST00000179901 471 ntBASIC17.73■□□□□ 0.43
NpcdF8VQB8 Mir6392-201ENSMUST00000184924 108 ntBASIC17.73■□□□□ 0.43
NpcdF8VQB8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NpcdF8VQB8 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.73■□□□□ 0.43
NpcdF8VQB8 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.73■□□□□ 0.43
NpcdF8VQB8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NpcdF8VQB8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NpcdF8VQB8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.72■□□□□ 0.43
NpcdF8VQB8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.72■□□□□ 0.43
NpcdF8VQB8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Mir1982-201ENSMUST00000157368 74 ntBASIC17.72■□□□□ 0.43
NpcdF8VQB8 Gm28760-201ENSMUST00000185995 736 ntBASIC17.72■□□□□ 0.43
NpcdF8VQB8 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.72■□□□□ 0.43
NpcdF8VQB8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.72■□□□□ 0.43
NpcdF8VQB8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.72■□□□□ 0.43
NpcdF8VQB8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NpcdF8VQB8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Gm19220-201ENSMUST00000222682 803 ntBASIC17.71■□□□□ 0.43
NpcdF8VQB8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.71■□□□□ 0.43
NpcdF8VQB8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms