Protein–RNA interactions for Protein: E9Q368

Tarbp1, TAR RNA-binding protein 1, mousemouse

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tarbp1E9Q368 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tarbp1E9Q368 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.52■□□□□ 0.87
Tarbp1E9Q368 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Gm12882-201ENSMUST00000121696 517 ntBASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Gm27701-201ENSMUST00000184498 110 ntBASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC20.51■□□□□ 0.87
Tarbp1E9Q368 AC155286.1-201ENSMUST00000218632 448 ntBASIC20.51■□□□□ 0.87
Tarbp1E9Q368 AC165157.4-201ENSMUST00000220587 139 ntBASIC20.51■□□□□ 0.87
Tarbp1E9Q368 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.5■□□□□ 0.87
Tarbp1E9Q368 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tarbp1E9Q368 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tarbp1E9Q368 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tarbp1E9Q368 Gm14452-201ENSMUST00000118680 1632 ntBASIC20.49■□□□□ 0.87
Tarbp1E9Q368 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tarbp1E9Q368 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tarbp1E9Q368 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tarbp1E9Q368 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC20.49■□□□□ 0.87
Tarbp1E9Q368 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tarbp1E9Q368 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Tarbp1E9Q368 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Gm12341-201ENSMUST00000119724 503 ntBASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Carlr-201ENSMUST00000181515 2574 ntBASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tarbp1E9Q368 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Gm15957-201ENSMUST00000118893 974 ntBASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Gm11918-201ENSMUST00000121660 179 ntBASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Mir7085-201ENSMUST00000184353 66 ntBASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tarbp1E9Q368 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC20.46■□□□□ 0.87
Tarbp1E9Q368 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tarbp1E9Q368 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms