Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf11E9PZM7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf11E9PZM7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf11E9PZM7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf11E9PZM7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf11E9PZM7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf11E9PZM7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf11E9PZM7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf11E9PZM7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Gm14723-201ENSMUST00000118686 215 ntBASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 AC159747.1-201ENSMUST00000219903 265 ntBASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Scaf11E9PZM7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Gm15236-201ENSMUST00000117309 379 ntBASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 AC153872.1-201ENSMUST00000199539 128 ntBASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Gm8775-201ENSMUST00000170943 1327 ntBASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scaf11E9PZM7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Gm27514-201ENSMUST00000183692 110 ntBASIC20.3■□□□□ 0.84
Scaf11E9PZM7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Gm7287-201ENSMUST00000205267 602 ntBASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Gm9299-201ENSMUST00000206392 1140 ntBASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 AC125117.1-201ENSMUST00000228121 468 ntBASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Gm5187-201ENSMUST00000117317 991 ntBASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Olfr286-202ENSMUST00000205305 969 ntBASIC20.3■□□□□ 0.84
Scaf11E9PZM7 AC126253.1-201ENSMUST00000227974 824 ntBASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scaf11E9PZM7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scaf11E9PZM7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scaf11E9PZM7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scaf11E9PZM7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms