Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Clip3B9EHT4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip3B9EHT4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip3B9EHT4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip3B9EHT4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip3B9EHT4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip3B9EHT4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip3B9EHT4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip3B9EHT4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip3B9EHT4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Clip3B9EHT4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.35□□□□□ -0.11
Clip3B9EHT4 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.35□□□□□ -0.11
Clip3B9EHT4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip3B9EHT4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Gm23935-201ENSMUST00000102303 57 ntBASIC14.34□□□□□ -0.11
Clip3B9EHT4 Gm24270-201ENSMUST00000102326 57 ntBASIC14.34□□□□□ -0.11
Clip3B9EHT4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Gm24245-201ENSMUST00000157318 57 ntBASIC14.34□□□□□ -0.11
Clip3B9EHT4 Gm5177-201ENSMUST00000183092 997 ntBASIC14.34□□□□□ -0.11
Clip3B9EHT4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip3B9EHT4 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.34□□□□□ -0.11
Clip3B9EHT4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clip3B9EHT4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
Clip3B9EHT4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clip3B9EHT4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clip3B9EHT4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clip3B9EHT4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.33□□□□□ -0.11
Clip3B9EHT4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.33□□□□□ -0.11
Clip3B9EHT4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms