Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.46□□□□□ -0.41
Col6a4A2AX52 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Gm15653-201ENSMUST00000119247 907 ntBASIC12.46□□□□□ -0.41
Col6a4A2AX52 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Col6a4A2AX52 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Col6a4A2AX52 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Col6a4A2AX52 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.46□□□□□ -0.41
Col6a4A2AX52 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a4A2AX52 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a4A2AX52 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a4A2AX52 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a4A2AX52 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.46□□□□□ -0.42
Col6a4A2AX52 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a4A2AX52 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Col6a4A2AX52 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Col6a4A2AX52 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Col6a4A2AX52 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Col6a4A2AX52 Gm24543-201ENSMUST00000103867 82 ntBASIC12.45□□□□□ -0.42
Col6a4A2AX52 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.45□□□□□ -0.42
Col6a4A2AX52 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.45□□□□□ -0.42
Col6a4A2AX52 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.45□□□□□ -0.42
Col6a4A2AX52 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col6a4A2AX52 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.44□□□□□ -0.42
Col6a4A2AX52 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.44□□□□□ -0.42
Col6a4A2AX52 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.44□□□□□ -0.42
Col6a4A2AX52 Gm18624-201ENSMUST00000220966 658 ntBASIC12.44□□□□□ -0.42
Col6a4A2AX52 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms