Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC22.86■■□□□ 1.25
Shroom2A2ALU4 Gm10156-201ENSMUST00000122364 462 ntBASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Gm4819-201ENSMUST00000182170 1009 ntBASIC22.85■■□□□ 1.25
Shroom2A2ALU4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Gm6621-201ENSMUST00000193251 772 ntBASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Gm8213-201ENSMUST00000118191 441 ntBASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Gm2991-201ENSMUST00000173338 480 ntBASIC22.85■■□□□ 1.25
Shroom2A2ALU4 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC22.85■■□□□ 1.25
Shroom2A2ALU4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Gm6015-201ENSMUST00000217493 1586 ntBASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Gm5637-201ENSMUST00000153890 1119 ntBASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Gm44397-201ENSMUST00000195950 113 ntBASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Gm8227-201ENSMUST00000223306 571 ntBASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Shroom2A2ALU4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Gm4909-201ENSMUST00000118749 794 ntBASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Selenot-ps-201ENSMUST00000119098 593 ntBASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Gm24990-201ENSMUST00000157406 323 ntBASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Gm18905-201ENSMUST00000205454 928 ntBASIC22.83■■□□□ 1.25
Shroom2A2ALU4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Shroom2A2ALU4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC22.83■■□□□ 1.24
Shroom2A2ALU4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Shroom2A2ALU4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Shroom2A2ALU4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Shroom2A2ALU4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Gm16342-201ENSMUST00000124025 1025 ntBASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Gm5620-201ENSMUST00000077991 1348 ntBASIC22.82■■□□□ 1.24
Shroom2A2ALU4 Gm8242-201ENSMUST00000193029 1420 ntBASIC22.82■■□□□ 1.24
Shroom2A2ALU4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC22.81■■□□□ 1.24
Shroom2A2ALU4 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC22.81■■□□□ 1.24
Shroom2A2ALU4 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Shroom2A2ALU4 AC154462.2-201ENSMUST00000227519 370 ntBASIC22.81■■□□□ 1.24
Shroom2A2ALU4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Shroom2A2ALU4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Shroom2A2ALU4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
Shroom2A2ALU4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms