Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm7230-201ENSMUST00000173026 815 ntBASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm6550-201ENSMUST00000187574 993 ntBASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm17971-201ENSMUST00000190239 806 ntBASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm7153-201ENSMUST00000117092 455 ntBASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm43767-201ENSMUST00000198933 381 ntBASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms