Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-1A0A075B5Z8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm12895-201ENSMUST00000122214 226 ntBASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm27704-201ENSMUST00000185094 107 ntBASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms