Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Gm12008-201ENSMUST00000117791 755 ntBASIC12.57□□□□□ -0.4
Gm5493S4R2D1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Mir5130-201ENSMUST00000175160 84 ntBASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Gm27389-201ENSMUST00000183622 195 ntBASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Gm5417-201ENSMUST00000079706 384 ntBASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5493S4R2D1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5493S4R2D1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5493S4R2D1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms