Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.92□□□□□ -0.5
Smco4Q9JIS3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Gm13158-201ENSMUST00000122007 736 ntBASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Gm42642-201ENSMUST00000200683 355 ntBASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.92□□□□□ -0.5
Smco4Q9JIS3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco4Q9JIS3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco4Q9JIS3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.9□□□□□ -0.5
Smco4Q9JIS3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms