Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Gm11745-201ENSMUST00000121669 448 ntBASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Gm26308-201ENSMUST00000157768 69 ntBASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.8□□□□□ -0.36
Ssmem1Q9D9Y8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Gm18737-201ENSMUST00000173594 937 ntBASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Gm18057-201ENSMUST00000208220 503 ntBASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssmem1Q9D9Y8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms