Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Gm24513-201ENSMUST00000174964 138 ntBASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem54Q9D7S1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Gm27397-201ENSMUST00000184997 107 ntBASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Gm37935-201ENSMUST00000192012 982 ntBASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem54Q9D7S1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Gm14822-201ENSMUST00000122247 291 ntBASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Gm2756-201ENSMUST00000195851 400 ntBASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem54Q9D7S1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms