Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Gm12008-201ENSMUST00000117791 755 ntBASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Gm15794-201ENSMUST00000120182 631 ntBASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Gm5587-201ENSMUST00000206270 674 ntBASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Gm9172-201ENSMUST00000212092 954 ntBASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Gm6433-201ENSMUST00000118634 875 ntBASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Gm18622-201ENSMUST00000219361 595 ntBASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hdhd3Q9CYW4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Gm17808-201ENSMUST00000200859 894 ntBASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms