Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nip7Q9CXK8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Gm42612-201ENSMUST00000197986 623 ntBASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Gm43170-201ENSMUST00000199827 612 ntBASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Nip7Q9CXK8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Gm22189-201ENSMUST00000103822 86 ntBASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Gm14042-201ENSMUST00000120139 833 ntBASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Gm23984-201ENSMUST00000157139 203 ntBASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Gm9522-201ENSMUST00000182394 926 ntBASIC18.35■□□□□ 0.53
Nip7Q9CXK8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nip7Q9CXK8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Gm28631-201ENSMUST00000190740 334 ntBASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Gm37230-201ENSMUST00000194491 818 ntBASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Gm6745-201ENSMUST00000199216 526 ntBASIC18.34■□□□□ 0.53
Nip7Q9CXK8 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Gm6180-201ENSMUST00000065243 498 ntBASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.34■□□□□ 0.53
Nip7Q9CXK8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nip7Q9CXK8 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.33■□□□□ 0.53
Nip7Q9CXK8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Nip7Q9CXK8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nip7Q9CXK8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nip7Q9CXK8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nip7Q9CXK8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nip7Q9CXK8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nip7Q9CXK8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Nip7Q9CXK8 Olfr286-202ENSMUST00000205305 969 ntBASIC18.33■□□□□ 0.52
Nip7Q9CXK8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nip7Q9CXK8 Gm9229-201ENSMUST00000222777 126 ntBASIC18.33■□□□□ 0.52
Nip7Q9CXK8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nip7Q9CXK8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nip7Q9CXK8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms