Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lrrc40Q9CRC8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Gm2272-201ENSMUST00000194903 582 ntBASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lrrc40Q9CRC8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Lrrc40Q9CRC8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lrrc40Q9CRC8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Lrrc40Q9CRC8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Lrrc40Q9CRC8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lrrc40Q9CRC8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lrrc40Q9CRC8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lrrc40Q9CRC8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Lrrc40Q9CRC8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Gm12350-201ENSMUST00000121208 462 ntBASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Lrrc40Q9CRC8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lrrc40Q9CRC8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms