Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rer1Q9CQU3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rer1Q9CQU3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rer1Q9CQU3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.14□□□□□ -0.47
Rer1Q9CQU3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Gm24589-201ENSMUST00000116692 94 ntBASIC12.14□□□□□ -0.47
Rer1Q9CQU3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Gm7787-201ENSMUST00000216858 688 ntBASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rer1Q9CQU3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Gm15173-201ENSMUST00000122049 433 ntBASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Rps4l-201ENSMUST00000071745 943 ntBASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms